Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865794:139865848:[+]	chrY:4925149:4925212:[+]	nonBSJ supported	CDS	circRNA 5': GUCA-AUCAGUGUCUUC--CAGAAAGAAAUC-----CAGGUCUUCCAGUCA-GU-CAGUGUCUUC 3' \|\|\| \|:\|\|\|\|:\|\|:\|\| \|\|: \| \|\|\|\| \|\| :\|\| \|\|\| \|\|\| \|\| \|\| \|: \|\|\| target 3':CUAGAGUGGUCAUAGGAGAAGUUAAGC-UUAGUCACCGUGUAG-AGGCCAGAACAUGUGAUCGAAC 5'	-32.70	57	RIC-seq
chrX:139865795:139865848:[+]	chrY:4925149:4925209:[+]	nonBSJ supported	CDS	circRNA 5': UCAAUCAGUGUCUUC--CAGAAAGAAAUC-----CAGGUCUUCCAGUCA-GU-CAGUGUCUUC 3' \|\| \|:\|\|\|\|:\|\|:\|\| \|\|: \| \|\|\|\| \|\| :\|\| \|\|\| \|\|\| \|\| \|\| \|: \|\|\| target 3':GAG-UGGUCAUAGGAGAAGUUAAGC-UUAGUCACCGUGUAG-AGGCCAGAACAUGUGAUCGAAC 5'	-32.20	1	RIC-seq
chrX:139865797:139865848:[+]	chrY:4925149:4925207:[+]	nonBSJ supported	CDS	circRNA 5':AAUCAGUGUCUUC--CAGAAAGAAAUC-----CAGGUCUUCCAGUCA-GU-CAGUGUCUUC 3' \|:\|\|\|\|:\|\|:\|\| \|\|: \| \|\|\|\| \|\| :\|\| \|\|\| \|\|\| \|\| \|\| \|: \|\|\| target 3':GUGGUCAUAGGAGAAGUUAAGC-UUAGUCACCGUGUAG-AGGCCAGAACAUGUGAUCGAAC 5'	-31.80	1	RIC-seq
chrX:139865800:139865848:[+]	chrY:4925149:4925203:[+]	nonBSJ supported	CDS	circRNA 5':CAGUGUCUUC--CAGAAAGAAAUC-----CAGGUCUUCCAGUCA-GU-CAGUGUCUUC 3' \|\|\|:\|\|:\|\| \|\|: \| \|\|\|\| \|\| :\|\| \|\|\| \|\|\| \|\| \|\| \|: \|\|\| target 3': UCAUAGGAGAAGUUAAGC-UUAGUCACCGUGUAG-AGGCCAGAACAUGUGAUCGAAC 5'	-26.00	1	RIC-seq
chrX:139865833:139865849:[+]	chrY:4925194:4925209:[+]	nonBSJ supported	CDS	circRNA 5':GUCAGUCAGUGUCUUCC 3' \|\|\| :\|\|\|\|:\|\|:\|\| target 3':GAGU-GGUCAUAGGAGA 5'	-17.10	1	RIC-seq