Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866620:139866642:[+] chr19:1300777:1300798:[+] nonBSJ supported 3UTR

circRNA 5':AGGUCUUCCAGCAUCU-CCAGGGC 3'


            || || ||||| |||::|


target  3':CCC-GACAAACGUAGCCGGUUUC 5'

 -14.70 1 RIC-seq
chrX:139866620:139866643:[+] chr19:1300776:1300798:[+] nonBSJ supported 3UTR

circRNA 5':AGGUCUUCCAGCAUCU-CCAGGGCU 3'


            || || ||||| |||::||


target  3':CCC-GACAAACGUAGCCGGUUUCG 5'

 -18.90 16 RIC-seq
chrX:139866629:139866643:[+] chr19:1300776:1300790:[+] nonBSJ supported 3UTR

circRNA 5':AGCAUCU-CCAGGGCU 3'


            ||||| |||::||


target  3':ACGUAGCCGGUUUCG 5'

 -17.40 2 RIC-seq