Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866125:139866171:[+] chr16:31000649:31000695:[-] nonBSJ supported 3UTR

circRNA 5':AUGGCCUCCAGGUCUUCCAGACUAUCCAUGUCUUCCAGAAAA-UCCUU 3'


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target  3':GACCCCU-GUCCUGUACGUCCCUCCUUCCCCCCCCGUCCUAAAAGGAC 5'

 -14.50 32 RIC-seq
chrX:139866126:139866143:[+] chr16:31000676:31000694:[-] nonBSJ supported 3UTR

circRNA 5':UGGCCUCCAGGUC-UUCCA 3'


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target  3':CCCCCCCGUCCUAAAAGGA 5'

 -10.30 24 RIC-seq
chrX:139866190:139866210:[+] chr16:31000663:31000684:[-] nonBSJ supported 3UTR

circRNA 5':AGCUUCCAAAAAAUCC-GGGUC 3'


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target  3':ACGUCCCUCCUUCCCCCCCCGU 5'

 -6.30 2 RIC-seq