Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865419:139865442:[+] chr19:17313016:17313029:[+] nonBSJ supported CDS

circRNA 5':GGUCUUCCAGAUAAUCCUGAGCUU 3'


            |||:| ||| ||:


target  3':ACAGGAA---------GAC-CGGU 5'

 -7.50 1 RIC-seq
chrX:139865472:139865494:[+] chr19:17313012:17313030:[+] nonBSJ supported CDS

circRNA 5':AUGU-CUUCCGGACAAUCCAUGUC 3'


            ||| |||| || |||:|:


target  3':CACAGGAAGACC-----GGUGCGA 5'

 -14.00 54 RIC-seq
chrX:139865472:139865494:[+] chr19:17313013:17313030:[+] nonBSJ supported CDS

circRNA 5':AUGU-CUUCCGGACAAUCCAUGUC 3'


            ||| |||| || |||:|:


target  3':CACAGGAAGACC-----GGUGCG 5'

 -13.40 1 RIC-seq