5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866127:139866147:[+] | chr6:12120825:12120856:[+] | nonBSJ supported | CDS |
circRNA 5':GGCCUCCAGGUC-UUC----------CAGACU 3' |||:| | || ||| ||||| target 3':ACGGGGAACGAGUAAGAAGACUCGUCGUCUGU 5' |
-17.00 | 1 | RIC-seq |
| chrX:139866143:139866174:[+] | chr6:12120846:12120865:[+] | nonBSJ supported | CDS |
circRNA 5':AGACUAUCCA-UGUCUUCCAGAAAAUCCUUGUC 3' |||| || ||:| |||||: target 3':ACUGAC--GUAACGG-----------GGAACGA 5' |
-12.70 | 1 | RIC-seq |
| chrX:139866603:139866662:[+] | chr6:12163564:12163609:[+] | nonBSJ supported | CDS |
circRNA 5':UGUCUUCCUAUAUCUCCAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUGCUCGUCUU 3' ||| |||:| ||| |:||| ||| ||||| |||| target 3':CCAGUCCUACACCAC--UCCGGU--GUC-------UUCCGUAGGGGC--GACGA-CAGAC 5' |
-29.10 | 1 | RIC-seq |