Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866531:139866550:[+] chr1:172544672:172544691:[+] nonBSJ supported CDS

circRNA 5':UGUCUUCCAGAA-AAUCCACG 3'


            || :|||| |||||||


target  3':UCAU-GGGUCGAAUUAGGUGA 5'

 -15.40 1 RIC-seq
chrX:139866531:139866572:[+] chr1:172544655:172544691:[+] nonBSJ supported CDS

circRNA 5':UGUCUUCCAGAA-AAUCCACGUCUUCCAGAAAAUAUAUGUCUU 3'


            || :|||| ||||||| ||:|||


target  3':UCAU-GGGUCGAAUUAGGUGAAUAAACAACC-----UAUAGAU 5'

 -15.70 9 RIC-seq