Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865761:139865810:[+]	chr12:54634877:54634935:[-]	nonBSJ supported	3UTR	circRNA 5':CAGUGUCUUC-CAGAAA-------GAAAUC-CAGGUCUUCCAGUCAAUC-AGUGUCUUCC 3' \|\|\|\|\|\|\|\| \|\|\|\| :\|\|\|\| \|\|::\|\|\|\|\|\|\|: \|\|\|: \|\|\| target 3':CUCACAGAACUGUCUAAAGUCACAUUUUAAAGUUUAGAAGGUUUCCUACCUCAUU-AAGA 5'	-28.60	1	RIC-seq
chrX:139865761:139865826:[+]	chr12:54634877:54634951:[-]	nonBSJ supported	3UTR	circRNA 5':CAGUGUCUUC-CAGAAA-------GAAAUC-CAGGUCUUCCAGUCAAUC-AGUGUCUUCCA-GAAAGAAAUCCAGGU 3' \|\|\|\|\|\|\|\| \|\|\|\| :\|\|\|\| \|\|::\|\|\|\|\|\|\|: \|\|\|: \|\|\| \|\| \|\|\| target 3':CUCACAGAACUGUCUAAAGUCACAUUUUAAAGUUUAGAAGGUUUCCUACCUCAUU-AAGACCCUCCUACUCACUCC 5'	-28.90	1	RIC-seq