5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865748:139865774:[+] | chr3:133307591:133307616:[+] | nonBSJ supported | 3UTR |
circRNA 5':UCUUCCAGUCAAUCAGUGUCUUCCAGA 3' ||||| :|| ||| ::|||| target 3':GGAAGGG-GGUGAACCACCUGGGGUCA 5' |
-18.30 | 7 | RIC-seq |
| chrX:139865787:139865813:[+] | chr3:133307591:133307616:[+] | nonBSJ supported | 3UTR |
circRNA 5':UCUUCCAGUCAAUCAGUGUCUUCCAGA 3' ||||| :|| ||| ::|||| target 3':GGAAGGG-GGUGAACCACCUGGGGUCA 5' |
-18.30 | 1 | RIC-seq |
| chrX:139866049:139866087:[+] | chr3:133292821:133292857:[+] | nonBSJ supported | 5UTR |
circRNA 5':UCCGGAUAAUUUGGGUCUU-CCUGAAAAUCUACGUCUUCC 3' |||| :|||: ||:| || || :|| target 3':CGGCCGCC---GCCCGCGCCGGGCGCCCCGAGGCUCGAGC 5' |
-19.50 | 22 | RIC-seq |
| chrX:139866050:139866087:[+] | chr3:133292821:133292852:[+] | nonBSJ supported | 5UTR |
circRNA 5':CCGGAUAAUUUGGGUCUU-CCUGAAAAUCUACGUCUUCC 3' ||| :|||: ||:| || || :|| target 3': GCC------GCCCGCGCCGGGCGCCCCGAGGCUCGAGC 5' |
-15.20 | 1 | RIC-seq |
| chrX:139866050:139866087:[+] | chr3:133292821:133292855:[+] | nonBSJ supported | 5UTR |
circRNA 5':CCGGAUAAUUUGGGUCUU-CCUGAAAAUCUACGUCUUCC 3' ||| :|||: ||:| || || :|| target 3': GCCGCC---GCCCGCGCCGGGCGCCCCGAGGCUCGAGC 5' |
-16.00 | 1 | RIC-seq |
| chrX:139866081:139866105:[+] | chr3:133292882:133292906:[+] | nonBSJ supported | CDS |
circRNA 5':GUCUUCCAAAAAAGCCAUGUCUUCC 3' ||:||| ||||||| |:|| target 3':GAGGAGGCAGAGUCGGUACCGGAGC 5' |
-24.60 | 25 | RIC-seq |
| chrX:139866082:139866105:[+] | chr3:133292882:133292906:[+] | nonBSJ supported | CDS |
circRNA 5': UCUUCCAAAAAAGCCAUGUCUUCC 3' ||:||| ||||||| |:|| target 3':GAGGAGGCAGAGUCGGUACCGGAGC 5' |
-24.60 | 4 | RIC-seq |