Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866095:139866153:[+]	chr3:133308255:133308306:[+]	nonBSJ supported	3UTR	circRNA 5':CCAUGUCUUCCAGAAAAUCCACAUCUUCCAAUGG-------CCUCCAGGUCUUCC-AGACUAUCCAU 3' \|\|: \|\|\|\|\| \|\|\|\|\| \|\|\| \|\|\| \|\|:\|\|\|:: \|:\| \|:\|\|\| target 3':UGUG-AGAAGACA--UUAGG-----------ACCCAUCGAAGGA-GUUCAGGGAAAUUUACUGGGUU 5'	-24.10	3	RIC-seq
chrX:139866122:139866153:[+]	chr3:133308255:133308292:[+]	nonBSJ supported	3UTR	circRNA 5': CCAA--UGGCCUCC--AGGUCUUCC-AGACUAUCCAU 3' \|\| \|:\|\| \|\|\| \|:\|\|\|:: \|:\| \|:\|\|\| target 3':AGGACCCAUCGAAGGAGUUCAGGGAAAUUUACUGGGUU 5'	-18.30	1	RIC-seq