Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866297:139866343:[+]	chr7:107816984:107817026:[-]	nonBSJ supported	CDS	circRNA 5':UGUCUUCCCUCAAAUCCAUAGCUUCCGAAAAAUCCAGGUCUUCCAGG 3' \|\|\|: \|\| \|\| \|\|\| \|\|::\|\|\| \|\|\|\| target 3':UCAGGUGGCACAGAACAAC-CGUC--CUUAAAA-GUUUAGAUGGUCU 5'	-19.70	2	RIC-seq
chrX:139866319:139866359:[+]	chr7:107816985:107817025:[-]	nonBSJ supported	CDS	circRNA 5':UUCCGAAAAAUCCAGGUCUUC----CAGGAAAUC-CGUGUCUUCCA 3' \|\|\|: \|\| \|\|\|\|\| \|\|\|\|\|\| \|: :\|\|\| \|\|\| target 3':CAGGU------GGCACAGAACAACCGUCCUUAAAAGUUUAGAUGGUC 5'	-20.40	29	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866297:139866343:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC
chrX:139866297:139866343:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC