Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866379:139866416:[+] chr16:24836228:24836266:[+] nonBSJ supported 3UTR

circRNA 5':CAAAGCCA-UGUCUUCCAUCAAAUUAAUGUC---UUCCAGCC 3'


            |||| || ::||| || |||||| :||||||


target  3':UUUUCUGUCGUAGACUUUCGUC---UUACAGUUUGAGGUCGA 5'

 -18.30 2 RIC-seq
chrX:139866379:139866426:[+] chr16:24836219:24836266:[+] nonBSJ supported 3UTR

circRNA 5':CAAAGCCA-UGUCUUCCAUCAAAUUAAUGUC---UUCCAGCCUACUUGUGUC 3'


            |||| || ::||| || |||||| :|||||| |:||


target  3':UUUUCUGUCGUAGACUUUCGUC---UUACAGUUUGAGGUCGAAAUU-CGCAA 5'

 -21.00 2 RIC-seq