Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865925:139865943:[+] chr1:40034575:40034594:[-] nonBSJ supported CDS

circRNA 5':AGCCAAUAUAUGUCU--UCCU 3'


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target  3':AUGGUGAAUAA-AGAAAAGGU 5'

 -8.70 12 RIC-seq
chrX:139865942:139865972:[+] chr1:40034568:40034596:[-] nonBSJ supported CDS

circRNA 5':CUGAAGAU-CCACGUC-UUCCAGAAAAUCCAUG 3'


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target  3':UACUAAAAUGGUGAAUAAAGAAA----AGGUAA 5'

 -10.00 1 RIC-seq