Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865335:139865356:[+] chr14:76644239:76644258:[+] nonBSJ supported CDS

circRNA 5': UCCAGGGUUUCCGAUGGC-ACCU 3'


            ||| :|:| ||||| |||


target  3':AAGGG-UCGA---CUACCAUUGGU 5'

 -14.10 12 RIC-seq
chrX:139865379:139865393:[+] chr14:76644250:76644268:[+] nonBSJ supported CDS

circRNA 5':CCGGG-UCU---UCCAGCG 3'


            || ||| :|||||


target  3':AGCAAGAGAAAAGGGUCGA 5'

 -12.50 1 RIC-seq
chrX:139865379:139865409:[+] chr14:76644239:76644268:[+] nonBSJ supported CDS

circRNA 5':CCGGG-UCU---UCCAGCGACUUCAAGUCUUCCAA 3'


            || ||| :||||| |||


target  3':AGCAAGAGAAAAGGGUCGACUACCAUU----GGU 5'

 -12.60 1 RIC-seq