Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865869:139865908:[+]	chr12:120636505:120636553:[-]	nonBSJ supported	CDS	circRNA 5':ACCAAAUCCAGGUCUUCCAGUCA--AUC-----CACAUCUU------CCGGAA 3' \|\|\| \|\|\| \|\|\|\|\|\|\| \|\|\| \|\|\|\|\|\| \|\|:\|\| target 3':GGGUGAAA---CAG-AGGUCAGAACUAGUCGACGUGUAGUGAGACUUGGUCUA 5'	-28.40	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr12:120636505:120636553:[-]	target	-	chr12:120636549-120636550	C>A	LICA-CN	ICGC
chrX:139865869:139865908:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC