Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865781:139865788:[+] chr20:20150085:20150090:[+] nonBSJ supported 5UTR

circRNA 5':UCCAGGUC 3'


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target  3': GG-CCAC 5'

 -3.50 1 RIC-seq
chrX:139866206:139866227:[+] chr20:20150075:20150089:[+] nonBSJ supported 5UTR

circRNA 5':GGGUCUUCCAGGAAAUCCGUGU 3'


            ||| |||| |||:


target  3':GCCA------CCUUCU-GCAUC 5'

 -7.30 3 RIC-seq