Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865747:139865765:[+] chr20:3553549:3553567:[+] nonBSJ supported CDS

circRNA 5':AUCUUCCAGUCAAUCAGUG 3'


            ||||| || ||||||


target  3':AAGAAGAACAAGUAGUCAA 5'

 -14.30 3 RIC-seq
chrX:139865825:139865843:[+] chr20:3553549:3553567:[+] nonBSJ supported CDS

circRNA 5':GUCUUCCAGUCAGUCAGUG 3'


            ||||| || :|||||


target  3':AAGAAGAACAAGUAGUCAA 5'

 -14.90 23 RIC-seq