Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866617:139866651:[+] chr17:26369208:26369249:[+] nonBSJ supported 5UTR

circRNA 5':UCCAGGUCUUCCAGCAUCUCCA--------GGGCUUCCAGCAU 3'


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target  3':CGGUCCCUUCCUCCGACCUCACUCCUCUCCUCCGCU-GUCGUC 5'

 -16.80 16 RIC-seq
chrX:139866632:139866643:[+] chr17:26449683:26449694:[+] nonBSJ supported CDS

circRNA 5':AUCUCCAGGGCU 3'


            ||| |:|:|


target  3':AAGACCUUCUGC 5'

 -6.00 1 RIC-seq
chrX:139866681:139866693:[+] chr17:26449689:26449698:[+] nonBSJ supported CDS

circRNA 5':CCAGCAUCUCUGU 3'


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target  3': GUC-UA-AGACC 5'

 -4.80 1 RIC-seq