Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866125:139866166:[+] chr11:89221895:89221940:[-] nonBSJ supported Intron

circRNA 5':AUGGCCUCCAGGUCUUCC---AGACUAUCCAUGUCUUCCA--GAAAA 3'


            || | ||:|| ||| |||||| ||||


target  3':AACAAGUAGUUCAAUACAUUAUCUACUCUAUUUCGAAGGUGACUUU 5'

 -12.30 1 RIC-seq
chrX:139866129:139866166:[+] chr11:89221888:89221940:[-] nonBSJ supported Intron

circRNA 5':CCUCCAGGUCUUCCAGACUAUCCAUGU----------------CUUCCA--GAAAA 3'


            |||||:|| || |||| |||||| ||||


target  3': GAGGUUCAACAAGUAGUUCAA-UACAUUAUCUACUCUAUUUCGAAGGUGACUUU 5'

 -17.70 2 RIC-seq
chrX:139866186:139866198:[+] chr11:89221923:89221935:[-] nonBSJ supported Intron

circRNA 5':CUAUAGCUUCCAA 3'


            || ||||||||


target  3':UAUUUCGAAGGUG 5'

 -12.60 1 RIC-seq