Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865801:139865848:[+]	chr11:130014205:130014242:[+]	nonBSJ supported	3UTR	circRNA 5':AGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAGUCAGUGUCUUC 3' \|\|\| \| \|\|\|\| \|\|\|:\| \|\| \|\|\|\|\|\|\|:\|\|\| target 3':CCACUCCCC-UGUUUCAUC---UCCGGC---UCC--CAGUCACGGAA 5'	-22.00	2	RIC-seq
chrX:139866303:139866341:[+]	chr11:129992224:129992256:[+]	nonBSJ supported	CDS	circRNA 5':CCCUCAAAUCCAUAGCUUCCGAAAAAUCCAGGUCUUCCA 3' \|\|\|\|\| \|\|\|\|:\|\|\|\| \|:\|\|\|\|\|\|\| target 3':AGGAGU--AGGUGUCGACGAAGACAC---UUCAGAAGG 5'	-32.50	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866303:139866341:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC