Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865668:139865679:[+] chr2:197036232:197036242:[-] nonBSJ supported 5UTR

circRNA 5':UCCAUGUCUUCC 3'


            || || ||||


target  3':UGG-ACCGAAGA 5'

 -6.20 5 RIC-seq
chrX:139865685:139865698:[+] chr2:197036231:197036242:[-] nonBSJ supported 5UTR

circRNA 5':AAUCUGUGUCUUCC 3'


            |:||| | ||||


target  3':CUGGAC-C-GAAGA 5'

 -8.70 11 RIC-seq
chrX:139865967:139865978:[+] chr2:197036232:197036242:[-] nonBSJ supported 5UTR

circRNA 5':UCCAUGUCUUCC 3'


            || || ||||


target  3':UGG-ACCGAAGA 5'

 -6.20 1 RIC-seq