Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866369:139866412:[+] chr14:102548030:102548082:[-] nonBSJ supported CDS

circRNA 5':CGUCUUCCAACAAAGCCAUG------------UCUUCCAUCAAAUUAAUGUCUUCC 3'


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target  3': CAGUAGGGAG--UCGGUCUCUAAUCAGAUGAAGAAGGUACGCACUACACAGCAGU 5'

 -26.20 6 RIC-seq
chrX:139866627:139866642:[+] chr14:102550258:102550273:[-] nonBSJ supported CDS

circRNA 5':CCAGCAUCUCCAGGGC 3'


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target  3':CGUUGUAGAGUGCCCU 5'

 -18.10 21 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr14:102548030:102548082:[-] target - chr14:102548079-102548080 G>A LICA-CN ICGC