Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865366:139865403:[+] chr2:152320434:152320483:[+] nonBSJ supported CDS

circRNA 5':UCUUCCAA---CAA-------CUCC----GGGUCUUC-CAGCGACUUCAAGUC 3'


            ||||| ||| |||| |:|| ||||:| || |||


target  3':UGAAGGAAAGAGUUAAUUUAAGAGGACAUCUCAAACAAGUCGUU--AG-UCAA 5'

 -17.30 1 RIC-seq
chrX:139865402:139865441:[+] chr2:152320441:152320483:[+] nonBSJ supported CDS

circRNA 5':UCUUCCAAUAAUCUCAAGG----UCUUCC--AGAUAAUCCUGAGCU 3'


            ||||| |||||| |||:| ||| | |||


target  3':UGAAGGAA---AGAGUUAAUUUAAGAGGACAUCUCAAACAAGUCGU 5'

 -18.40 1 RIC-seq
chrX:139865402:139865447:[+] chr2:152320435:152320483:[+] nonBSJ supported CDS

circRNA 5':UCUUCCAAUAAUCUCAAGG----UCUUCC--AGAUAAUCCUGAGCUUCCAGA 3'


            ||||| |||||| |||:| ||| | ||| |||


target  3':UGAAGGAA---AGAGUUAAUUUAAGAGGACAUCUCAAACAAGUCGUUAGUCA 5'

 -21.10 17 RIC-seq