Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866473:139866537:[+]	chr17:76047015:76047073:[+]	nonBSJ supported	CDS	circRNA 5':GGUAUGUCUUCCAACAAAGGUACGUCUUCCAGAAAAUCCAC--GUC-UUCCAACCAAGCCAUGUCUUC 3' \|\| \|\|:\|:: \|\| :\|\| \|:\|\|\|\|\| \|\| \|\|\| \|\|\|\|\|\|\|\|\| :\|\| \|\| \|:\| target 3':ACA-ACGGGG-------UCGGUGACAAGGGUCUAG-AGCACCACAGUAAGGUUGGUCUGGGACUGGAU 5'	-41.60	2	RIC-seq
chrX:139866509:139866541:[+]	chr17:76045462:76045499:[+]	nonBSJ supported	CDS	circRNA 5':UCCACG---UCUUCCAA-CCAAGC-CAUGUCUUCCAGA 3' \|\|\|\|\| :\|\|\|\| \|\|\|\|\| \|\| \|:\| \|\|\| target 3':CGGUGCCAAGGAAGUACAGGUUCAUGUCCGGUCCGUCG 5'	-22.00	2	RIC-seq
chrX:139866513:139866537:[+]	chr17:76047015:76047040:[+]	nonBSJ supported	CDS	circRNA 5':CGUC-UUCCAACCAAGCCAUGUCUUC 3' \|\|\| \|\|\|\|\|\|\|\|\| :\|\| \|\| \|:\| target 3':ACAGUAAGGUUGGUCUGGGACUGGAU 5'	-25.60	1	RIC-seq