Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866486:139866522:[+] chr5:7438281:7438310:[+] nonBSJ supported Intron

circRNA 5':ACAAAGGUACGUCUUCCAGAAAAUCCACGUCUUCCAA 3'


            ||||::|| | |||| |||| | |||||


target  3':AGUUUUUAUAGAACAGGU------GGUGGA-AAGGUA 5'

 -19.80 1 RIC-seq
chrX:139866486:139866525:[+] chr5:7438260:7438310:[+] nonBSJ supported Intron

circRNA 5':ACAAAGGUA-C--GUCUUCCAGAAAAUCCA-C----GUCUUCCA----ACCA 3'


            ||||::|| | |||: ||| |||| | :|||||| |||


target  3':AGUUUUUAUAGAACAGGUGGUGGAA-AGGUAGACCUUAGAAGGCCACCUGGA 5'

 -24.80 1 RIC-seq