5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865531:139865560:[+] | chr2:210597196:210597231:[+] | nonBSJ supported | 3UTR |
circRNA 5':UUCCAG------CAAAUCCAGUCUUC-CAGCAAUUAC 3' ||||| |||||| |: |:|| ||||||||| target 3':CGGGUCUAACCAGUUUAGUUU-GGAGUGUCGUUAAUU 5' |
-24.90 | 16 | RIC-seq |
| chrX:139865536:139865560:[+] | chr2:210597196:210597220:[+] | nonBSJ supported | 3UTR |
circRNA 5':GCAAAUCCAGUCUUC-CAGCAAUUAC 3' |||||| |: |:|| ||||||||| target 3':AGUUUAGUUU-GGAGUGUCGUUAAUU 5' |
-21.40 | 2 | RIC-seq |
| chrX:139865537:139865560:[+] | chr2:210597196:210597220:[+] | nonBSJ supported | 3UTR |
circRNA 5': CAAAUCCAGUCUUC-CAGCAAUUAC 3' |||||| |: |:|| ||||||||| target 3':AGUUUAGUUU-GGAGUGUCGUUAAUU 5' |
-21.20 | 6 | RIC-seq |
| chrX:139865540:139865560:[+] | chr2:210597196:210597231:[+] | nonBSJ supported | 3UTR |
circRNA 5':AUCCAGU--------------CUUC-CAGCAAUUAC 3' ||||| |:|| ||||||||| target 3':CGGGUCUAACCAGUUUAGUUUGGAGUGUCGUUAAUU 5' |
-17.70 | 1 | RIC-seq |
| chrX:139865541:139865560:[+] | chr2:210597196:210597231:[+] | nonBSJ supported | 3UTR |
circRNA 5': UCCAGU--------------CUUC-CAGCAAUUAC 3' ||||| |:|| ||||||||| target 3':CGGGUCUAACCAGUUUAGUUUGGAGUGUCGUUAAUU 5' |
-17.60 | 1 | RIC-seq |
| chrX:139865684:139865746:[+] | chr2:210595830:210595889:[+] | nonBSJ supported | 3UTR |
circRNA 5':AAAU-CUGUGUCUUCCACCAAAUCCAAGUCUUCCAGU-AAAUC--UAGUUCUUCCAGAAAAAUCUAG 3' ||| ||||:|| || ||| || |||: |||| ||||||| target 3':AUUAUGACAUAGUU--UGUCUACCUUUCCCCCA--CACUUUGACCAUCACACCUGUG--UUUAGAU 5' |
-11.70 | 2 | RIC-seq |
| chrX:139865684:139865747:[+] | chr2:210595829:210595889:[+] | nonBSJ supported | 3UTR |
circRNA 5':AAAU-CUGUGUCUUCCACCAAAUCCAAGUCUUCCAGU-AAAUC--UAGUUCUUCCAGAAAAAUCUAGA 3' ||| ||||:|| || ||| || |||: |||| |||||||| target 3':AUUAUGACAUAGUU--UGUCUACCUUUCCCCCA--CACUUUGACCAUCACACCUGUG--UUUAGAUC 5' |
-14.60 | 19 | RIC-seq |
| chrX:139865687:139865709:[+] | chr2:210595793:210595814:[+] | nonBSJ supported | 3UTR |
circRNA 5': UCUGUGUCUUCCACCAAAUCCAA 3' |||: :|| ||| |||| target 3':AAGAU-UAGUCUGUGCUC-AGGUA 5' |
-9.80 | 1 | RIC-seq |
| chrX:139865689:139865728:[+] | chr2:210595827:210595847:[+] | nonBSJ supported | 3UTR |
circRNA 5':UGUGUCUUCCACCAAAUCCAAGUCUUCCAGUAAAUCUAGU 3' |||| ||| ||||||||: target 3':UCACACCU-GUG-------------------UUUAGAUCGA 5' |
-11.50 | 2 | RIC-seq |
| chrX:139865689:139865729:[+] | chr2:210595806:210595847:[+] | nonBSJ supported | 3UTR |
circRNA 5':UGUGUCUUCCACCAAAUCCAAGUCUUCCAGUAAA---UCUAGUU 3' |||| || |||||| ||: ||: ||||:|: target 3':UCACACCU-GU-GUUUAGA-UCGACUAGUUGACUGUAAGAUUAGU 5' |
-12.40 | 18 | RIC-seq |
| chrX:139866216:139866287:[+] | chr2:210595790:210595857:[+] | nonBSJ supported | 3UTR |
circRNA 5':GGAAAUCC---GUGUCUUCCAGCAAGUCCACGUCUUCCAACAAAGCCAUGUCUUC-CAGACUAUCCAUGUCU-UCCA 3' ||||: |||| :|||:|| |: |||| | ||| ||| ||||| |||: ||| target 3':ACUUUGACCAUCACACCUG--UGUUUAGAU-CGACUAGUUGA--CUGUA-AGAUUAGUCUGUGCU---CAGGUAGGA 5' |
-28.00 | 23 | RIC-seq |
| chrX:139866223:139866287:[+] | chr2:210595790:210595847:[+] | nonBSJ supported | 3UTR |
circRNA 5':CGUGUCUUCCAGCAAGUCCACGUCUUCCAACAAAGCCAUGUCUUC-CAGACUAUCCAUGUCU-UCCA 3' |||| :|||:|| |: |||| | ||| ||| ||||| |||: ||| target 3':UCACACCUG--UGUUUAGAU-CGACUAGUUGA--CUGUA-AGAUUAGUCUGUGCU---CAGGUAGGA 5' |
-27.00 | 31 | RIC-seq |
| chrX:139866233:139866287:[+] | chr2:210595790:210595838:[+] | nonBSJ supported | 3UTR |
circRNA 5':AGCAAGUCCACGUCUUCCAACAAAGCCAUGUCUUC-CAGACUAUCCAUGUCU-UCCA 3' ||||:|| |: |||| | ||| ||| ||||| |||: ||| target 3': UGUUUAGAU-CGACUAGUUGA--CUGUA-AGAUUAGUCUGUGCU---CAGGUAGGA 5' |
-23.00 | 1 | RIC-seq |
| chrX:139866249:139866287:[+] | chr2:210595790:210595824:[+] | nonBSJ supported | 3UTR |
circRNA 5':CCAACAAAGCCAUGUCUUC-CAGACUAUCCAUGUCU-UCCA 3' |||| | ||| ||| ||||| |||: ||| target 3':AGUUGA--CUGUA-AGAUUAGUCUGUGCU---CAGGUAGGA 5' |
-17.90 | 2 | RIC-seq |
| chrX:139866773:139866795:[+] | chr2:210596204:210596231:[+] | nonBSJ supported | 3UTR |
circRNA 5':CCA-GUGU-GCU-GAUCU--UCUGACAU 3' || ||:| :|| ||:|: :|: ||| target 3':AGUACAUAUUGACCUGGGUGGGGGUGUU 5' |
-15.00 | 16 | RIC-seq |
| chrX:139866773:139866795:[+] | chr2:210596205:210596231:[+] | nonBSJ supported | 3UTR |
circRNA 5':CCA-GUGU-GCU-GAUCU--UCUGACAU 3' || ||:| :|| ||:|: :|: ||| target 3':AGUACAUAUUGACCUGGGUGGGGGUGU 5' |
-14.80 | 1 | RIC-seq |
| chrX:139865335:139865391:[+] | chr2:210559327:210559386:[+] | nonBSJ supported | CDS |
circRNA 5': UCCAGGGUUUCCGAUGGCACCUGUG-UCAAGGUCUUCCAA-CAACUCCGG--GUCUUCCAG 3' ||| ||: || ::||| |||: ||| :| |||| | || |:|| |||| target 3':GAGGA-CCGUUGGA-GUCGUAGACGUGAGUGUCUUC-GGUUAGAACUGGAACACGGACGGUCU 5' |
-37.80 | 2 | RIC-seq |
| chrX:139865335:139865392:[+] | chr2:210559327:210559386:[+] | nonBSJ supported | CDS |
circRNA 5': UCCAGGGUUUCCGAUGGCACCUGUG-UCAAGGUCUUCCAA-CAACUCCGG--GUCUUCCAGC 3' ||| ||: || ::||| |||: ||| :| |||| | || |:|| |||| target 3':GAGGA-CCGUUGGA-GUCGUAGACGUGAGUGUCUUC-GGUUAGAACUGGAACACGGACGGUCU 5' |
-38.20 | 5 | RIC-seq |
| chrX:139865339:139865382:[+] | chr2:210559327:210559393:[+] | nonBSJ supported | CDS |
circRNA 5':GGGUUUCCGA-UGGC-ACCU--GUGUCAA--------------GGUCUU--CCAACAA-CU-CCGG 3' |:||||| |||| |||| |::|| ::|||| || || ||:| target 3':ACUAAAGGAGGACCGUUGGAGUCGUAGACGUGAGUGUCUUCGGUUAGAACUGGAACACGGACGGUCU 5' |
-30.90 | 1 | RIC-seq |
| chrX:139865339:139865384:[+] | chr2:210559354:210559393:[+] | nonBSJ supported | CDS |
circRNA 5':GGGUUUCCGA-UGGC-ACCUGUGUCAAGGUCUUCCAACAACUC-CGGGU 3' |:||||| |||| ||| ||| :||| | |||| |:|: target 3':ACUAAAGGAGGACCGUUGG----AGUCGUAGACG-----UGAGUGUCUU 5' |
-29.80 | 1 | RIC-seq |
| chrX:139865339:139865392:[+] | chr2:210559321:210559393:[+] | nonBSJ supported | CDS |
circRNA 5':GGGUUUCCGA-UGGC-ACCU--GUGUCAA--------------GGUCUU--CCAACAA-CU-CCGGGUCUUCCAGC 3' |:||||| |||| |||| |::|| ::|||| || || ||:|:||| ||| target 3':ACUAAAGGAGGACCGUUGGAGUCGUAGACGUGAGUGUCUUCGGUUAGAACUGGAACACGGACGGUCUAGA---UCG 5' |
-39.50 | 31 | RIC-seq |
| chrX:139865339:139865392:[+] | chr2:210559327:210559393:[+] | nonBSJ supported | CDS |
circRNA 5':GGGUUUCCGA-UGGC-ACCU--GUGUCAAGGU-CUU-------CCAA-CAACUCCGG--GUCUUCCAGC 3' |:||||| |||| |||| |::|| |: ||: |||| | || |:|| |||| target 3':ACUAAAGGAGGACCGUUGGAGUCGUAGA--CGUGAGUGUCUUCGGUUAGAACUGGAACACGGACGGUCU 5' |
-38.00 | 1 | RIC-seq |
| chrX:139865339:139865392:[+] | chr2:210559348:210559393:[+] | nonBSJ supported | CDS |
circRNA 5':GGGUUUCCGA-UGGC-ACCUGUGUCAAGGUCUUCCAACAACUC-CGGGUCUUCCAGC 3' |:||||| |||| ||| ||| :||| | |||| |:|: |||: target 3':ACUAAAGGAGGACCGUUGG----AGUCGUAGACG-----UGAGUGUCUUC--GGUUA 5' |
-32.50 | 1 | RIC-seq |
| chrX:139865490:139865521:[+] | chr2:210557684:210557714:[+] | nonBSJ supported | CDS |
circRNA 5':AUGUCUUCCAAGAAGCUCCAAGUCUU-CCAGUA 3' || ||||| || | ||||| target 3':AAC-GAAGGCAAC-CGUAAAGCUACUUGGUCAG 5' |
-14.60 | 41 | RIC-seq |
| chrX:139865970:139865999:[+] | chr2:210557593:210557618:[+] | nonBSJ supported | CDS |
circRNA 5':AUGUCUUCCAGAAAAUCCAUGUCUUCCAGU 3' ||||||| |||||||||||| target 3':GACAGAAGACAAA----GUACAGAAGGUCC 5' |
-26.80 | 6 | RIC-seq |
| chrX:139865970:139865999:[+] | chr2:210557594:210557618:[+] | nonBSJ supported | CDS |
circRNA 5':AUGUCUUCCAGAAAAUCCAUGUCUUCCAGU 3' ||||||| |||||||||||| target 3':GACAGAAGACAAA----GUACAGAAGGUC 5' |
-26.40 | 1 | RIC-seq |
| chrX:139866085:139866124:[+] | chr2:210558129:210558166:[+] | nonBSJ supported | CDS |
circRNA 5': UCCAAAAAA-GC-CAUGUCUUCCAGAAAAUCCACAUCUUCCA 3' ||| || || ||||: || |:||| target 3':UAGGGAAACGACGUGU-CAGAGAA-CUAAAUACC---GGAGGA 5' |
-13.80 | 1 | RIC-seq |
| chrX:139866102:139866140:[+] | chr2:210558124:210558166:[+] | nonBSJ supported | CDS |
circRNA 5':UUCCAGAAAAUCCACA-UCUUCCA----AUGGCCUCCAGGUCUU 3' ||| |||| |||: ||||||||| ||| target 3':UAGGGAAACGACGUGUCAGAGAACUAAAUACCGGAGGAAAAGA 5' |
-26.10 | 5 | RIC-seq |
| chrX:139866102:139866141:[+] | chr2:210558123:210558166:[+] | nonBSJ supported | CDS |
circRNA 5':UUCCAGAAAAUCCACA-UCUUCCA----AUGGCCUCCAGGUCUUC 3' ||| |||| |||: ||||||||| |||| target 3':UAGGGAAACGACGUGUCAGAGAACUAAAUACCGGAGGAAAAGAA 5' |
-27.00 | 4 | RIC-seq |
| chrX:139866119:139866144:[+] | chr2:210558738:210558765:[+] | nonBSJ supported | CDS |
circRNA 5':CUUCCAA--UGGC-CUCCAGGUCUUCCAG 3' |||| ||: |||| ||| ||| target 3':AAAGGACAAACUUUGAGGAACAGU-GGUA 5' |
-16.10 | 3 | RIC-seq |
| chrX:139866134:139866174:[+] | chr2:210558742:210558774:[+] | nonBSJ supported | CDS |
circRNA 5':AGGUCUUCCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGUC 3' || ||| ||| ||| |||| |||||||| target 3':ACCCUAAGAAA----AGG-ACAAA----CUUUGAGGAACAGU 5' |
-17.30 | 19 | RIC-seq |
| chrX:139866134:139866179:[+] | chr2:210558739:210558774:[+] | nonBSJ supported | CDS |
circRNA 5':AGGUCUUCCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGUCUUCCC 3' || ||| ||| ||| |||| |||||||| || target 3':ACCCUAAGAAA----AGG-ACAAA----CUUUGAGGAACAGU-GGU 5' |
-19.90 | 29 | RIC-seq |
| chrX:139866233:139866261:[+] | chr2:210574814:210574840:[+] | nonBSJ supported | CDS |
circRNA 5':AGCAAGUCCACGUCUUC-CAACAAA-GCCAU 3' || | || ||||| || :||| target 3':CCG--CUGGA--AGAAGAGUGAGCCGUGGUU 5' |
-13.20 | 1 | RIC-seq |
| chrX:139866274:139866300:[+] | chr2:210558742:210558764:[+] | nonBSJ supported | CDS |
circRNA 5':AUCCAUGUCUUCCAGAAAAUCCUUGUC 3' ||| ||| |||| |||||||| target 3':AAGG-ACAAA----CUUUGAGGAACAGU 5' |
-16.80 | 2 | RIC-seq |
| chrX:139866633:139866695:[+] | chr2:210559336:210559387:[+] | nonBSJ supported | CDS |
circRNA 5':UCUCCAGGGCU-UC-CAGCAUCUGCUCGUCUUCCAACAUCU-CCACGUCUUCCAGCAUCUCUGUGU 3' |||| ||| :| |||||||||| | || ||| ||| :|||| | |:|| |||| target 3':GGAGGA-CCGUUGGAGUCGUAGACGUG-AG-----UGUCUUCGGU-UAGAA---C-UGGA-ACAC 5' |
-40.60 | 15 | RIC-seq |
| chrX:139866638:139866665:[+] | chr2:210559382:210559399:[+] | nonBSJ supported | CDS |
circRNA 5':AGGGCUUCCAGCAUCUGCUCGUCUUCCA 3' ||| ||| ||:||| target 3':ACCCU---------GACUAA-AGGAGGA 5' |
-12.30 | 1 | RIC-seq |
| chrX:139866755:139866778:[+] | chr2:210558076:210558102:[+] | nonBSJ supported | CDS |
circRNA 5':CCAUG-UCUUC--CAACGUCUCCAGUG 3' |||| ||||| |||| ||| target 3':UGUACAAGAAGAUGUUGACCUUA-CACU 5' |
-12.80 | 1 | RIC-seq |
| chrX:139866755:139866782:[+] | chr2:210558073:210558102:[+] | nonBSJ supported | CDS |
circRNA 5':CCAUG-UCUUC--CAACGUCUCCAGUGUGCU 3' |||| ||||| |||| ||| || target 3':UGUACAAGAAGAUGUUGACCUUA-CACUCGU 5' |
-17.40 | 18 | RIC-seq |
| chrX:139865458:139865479:[+] | chr2:210526367:210526387:[+] | nonBSJ supported | Exon |
circRNA 5':CUUCCAGACAAUCCAUGUCUUC 3' ||| |||||| |||||| target 3':AAAGAUA-GUUAGGAACAGAAA 5' |
-15.50 | 3 | RIC-seq |
| chrX:139865458:139865484:[+] | chr2:210526361:210526387:[+] | nonBSJ supported | Exon |
circRNA 5':CUUCCAGACAAUCCAUGUCUUCCGGAC 3' ||| |||||| |||||| | || target 3':AAAGAUA-GUUAGGAACAGAAAGAGUGA 5' |
-15.70 | 49 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr2:210558123:210558166:[+] | target | - | chr2:210558132-210558133 | A>T | PACA-CA | ICGC |
| chr2:210558124:210558166:[+] | target | - | chr2:210558132-210558133 | A>T | PACA-CA | ICGC |
| chr2:210558129:210558166:[+] | target | - | chr2:210558132-210558133 | A>T | PACA-CA | ICGC |
| chrX:139866773:139866795:[+] | circRNA | - | chrX:139866793-139866794 | C>T | LICA-CN | ICGC |