Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865997:139866012:[+] chrX:110540103:110540120:[-] nonBSJ supported 3UTR

circRNA 5':AGUAAC-CUCCCAGUCU 3'


            |:||| || |||||


target  3':GCGUUGUGAUUCUCAGAC 5'

 -10.70 3 RIC-seq
chrX:139866204:139866236:[+] chrX:110653365:110653392:[-] nonBSJ supported CDS

circRNA 5':CCGGGUCUUCCAGGAAAUCCGUGUCUUCCAGCA 3'


            |:|||| |||| || |:||| |||


target  3':AGUCCAGUCGGUCGUUC---CGCAGUU--UCGA 5'

 -26.00 11 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:110653365:110653392:[-] target 1180597 chrX:110653386-110653387 C>CA Abnormality_of_the_nervous_system ClinVar