5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866668:139866696:[+] | chr12:56999676:56999707:[-] | nonBSJ supported | CDS |
circRNA 5':AUCUCCA-CG-UCUUCC-AGCAUCUCUGUGUC 3' |||| || ||:||| ||| :|||||||| target 3':CGGAGACGGCAAGGAGGUUCGCGGAGACACAC 5' |
-32.30 | 2 | RIC-seq |
| chrX:139866669:139866696:[+] | chr12:56999658:56999707:[-] | nonBSJ supported | CDS |
circRNA 5':UCUCCA--------------------CG-UCUUCC-AGCAUCUCUGUGUC 3' ||||| || ||:||| ||| :|||||||| target 3':GGAGGUUCUAGUAGACGACGGAGACGGCAAGGAGGUUCGCGGAGACACAC 5' |
-32.80 | 26 | RIC-seq |
| chrX:139866669:139866696:[+] | chr12:56999676:56999707:[-] | nonBSJ supported | CDS |
circRNA 5': UCUCCA-CG-UCUUCC-AGCAUCUCUGUGUC 3' |||| || ||:||| ||| :|||||||| target 3':CGGAGACGGCAAGGAGGUUCGCGGAGACACAC 5' |
-32.20 | 1 | RIC-seq |
| chrX:139866670:139866696:[+] | chr12:56999677:56999707:[-] | nonBSJ supported | CDS |
circRNA 5': CUCCA-CG-UCUUCC-AGCAUCUCUGUGUC 3' ||| || ||:||| ||| :|||||||| target 3':GGAGACGGCAAGGAGGUUCGCGGAGACACAC 5' |
-32.00 | 1 | RIC-seq |
| chrX:139866674:139866696:[+] | chr12:56999683:56999707:[-] | nonBSJ supported | CDS |
circRNA 5':ACG-UCUUCC-AGCAUCUCUGUGUC 3' || ||:||| ||| :|||||||| target 3':GGCAAGGAGGUUCGCGGAGACACAC 5' |
-29.20 | 1 | RIC-seq |