Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866330:139866337:[+] chr11:114311434:114311442:[+] nonBSJ supported CDS

circRNA 5':CCAG-GUCU 3'


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target  3':AGUCUCAGU 5'

 -6.90 8 RIC-seq
chrX:139866330:139866355:[+] chr11:114311413:114311442:[+] nonBSJ supported CDS

circRNA 5':CCAG-GUCUUC---CAGGAAAUCCGUGUCU 3'


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target  3':AGUCUCAGUCAAUAGUCUGUCCGGUAGAGU 5'

 -16.00 7 RIC-seq