Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865836:139865852:[+] chr3:171451276:171451293:[-] nonBSJ supported CDS

circRNA 5':AGUC-AGU-GUCUUCCAGA 3'


            ||| ||| :||||||||


target  3':ACAGUUCAUUAGAAGGUC 5'

 -19.60 1 RIC-seq
chrX:139865836:139865852:[+] chr3:171451276:171451294:[-] nonBSJ supported CDS

circRNA 5':AGUC-AGU-GUCUUCCAGA 3'


            ||| ||| :||||||||


target  3':ACAGUUCAUUAGAAGGUCA 5'

 -19.60 25 RIC-seq