Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866156:139866173:[+] chr1:8921153:8921167:[-] nonBSJ supported 3UTR

circRNA 5':CUUCCAGAAAAUCCUUGU 3'


            ||| ||| ||||


target  3':UGAGAUCUGU---GAACC 5'

 -4.80 17 RIC-seq
chrX:139866157:139866173:[+] chr1:8921153:8921167:[-] nonBSJ supported 3UTR

circRNA 5': UUCCAGAAAAUCCUUGU 3'


            ||| ||| ||||


target  3':UGAGAUCUGU---GAACC 5'

 -4.60 1 RIC-seq
chrX:139865878:139865895:[+] chr1:8923963:8923980:[-] nonBSJ supported CDS

circRNA 5':AGGUCUUCCAGUCAAUCC 3'


            |||| ||:|||||


target  3':GCCAGUGCCUCGGUUAGA 5'

 -16.40 16 RIC-seq