Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866660:139866679:[+] chr19:44079601:44079620:[-] nonBSJ supported 5UTR

circRNA 5':CUUCCAACAUCUCCACGUCU 3'


            |||| ||| || |||||


target  3':AGAGGCCGUACAGUUGCAGC 5'

 -14.30 16 RIC-seq
chrX:139866661:139866679:[+] chr19:44079601:44079620:[-] nonBSJ supported 5UTR

circRNA 5': UUCCAACAUCUCCACGUCU 3'


            |||| ||| || |||||


target  3':AGAGGCCGUACAGUUGCAGC 5'

 -14.10 4 RIC-seq
chrX:139866662:139866679:[+] chr19:44079602:44079620:[-] nonBSJ supported 5UTR

circRNA 5': UCCAACAUCUCCACGUCU 3'


            ||| ||| || |||||


target  3':GAGGCCGUACAGUUGCAGC 5'

 -13.50 1 RIC-seq