Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866016:139866038:[+] chr5:131545998:131546030:[-] nonBSJ supported CDS

circRNA 5':AGAAAAUCCAC------------GUCUUCCCAACA 3'


            || |||| :|| ||||||


target  3':ACUCG-AGGUCCCGUGCCACGUCUAGU-GGGUUGA 5'

 -13.00 10 RIC-seq
chrX:139866023:139866038:[+] chr5:131546016:131546030:[-] nonBSJ supported CDS

circRNA 5':CCACGUCUUCCCAACA 3'


            || :|| ||||||


target  3':CGUCUAGU-GGGUUGA 5'

 -12.40 1 RIC-seq