Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865633:139865684:[+]	chr4:54327656:54327703:[-]	nonBSJ supported	CDS	circRNA 5':CAAGGUC---UUCCAUCAAAUACAGAUCUUCC-AGCUAAUCCAUGUCUUCCAGAAA 3' \|\|\|\|\| \|\|\|\|\|\| \|\| \|\|\|\|\| \|:\|: \|\|\| \|\|\|\|\| target 3':UUUCCAAACAAAGGUAACAUA-----AGAAGUAUUGG--AGGAUGUUAC-GUCUUC 5'	-18.20	1	RIC-seq
chrX:139865671:139865714:[+]	chr4:54327662:54327706:[-]	nonBSJ supported	CDS	circRNA 5':AUGUCUUCCAGAAAAAUCUGUGU--CUUCCACCAAAUCC-AAGUCUU 3' \|\|\| \|\|\|\|\| \|\|\| \|:\|\|\| \|\|\| \|\|\|:\|: target 3':AACA-AAGGUAACAUAAGAAGUAUUGGAGGAUGUUACGUCUUCGGG 5'	-19.50	20	RIC-seq