Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866051:139866103:[+] chr19:14279193:14279244:[-] nonBSJ supported Intron

circRNA 5':CGGAUAAUUUGGGUCU-UCCUGAAAAUCUACGUCUUCCAAAAAAGC-CAUGUCUU 3'


            ||| ||:| ||| :||: || |||:|| :| :| |||||||


target  3':UCCUC---AAUCGAGACGGGGGUUGUAGGUGGGGCAUACACACGUGUGUACAGAC 5'

 -34.60 1 RIC-seq
chrX:139866078:139866103:[+] chr19:14279212:14279244:[-] nonBSJ supported Intron

circRNA 5':UACGUCUUCCAAAAAA------GC-CAUGUCUU 3'


            ||:||: || :| |||||||


target  3':UUGUAGGUGGGGCAUACACACGUGUGUACAGAC 5'

 -17.10 1 RIC-seq