Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866312:139866358:[+]	chr12:85255586:85255629:[-]	nonBSJ supported	CDS	circRNA 5':CCAUAGCUUCCGAAAAAUC-CAGG-UCUUCCAGGAAAUCCGUGUCUUCC 3' \|\|\| \|\|:: \| \|\| \|\|\|\| \|\|\|\| \|\|\|\|\| \|\| \| \|\|:\|\| target 3':AGUAGCGGGAGAUUCA-AGUGUCCGAGAAAGUCCU---GGGA-AGGAGA 5'	-29.80	23	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866312:139866358:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC