Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866295:139866322:[+] chr3:148752721:148752749:[-] nonBSJ supported CDS

circRNA 5': CUUGUCUUCCC-UCAAAUCCAUAGCUUCC 3'


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target  3':AGAAC-GAAGACUGGUUCAGAUACCGUAGA 5'

 -13.50 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chrX:139866295:139866322:[+] circRNA - chrX:139866318-139866319 C>T BTCA-JP ICGC