Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865749:139865783:[+] chr7:120610804:120610836:[+] nonBSJ supported CDS

circRNA 5':CUUCCAGU-CAAUCAGUGUCUUCCAGAAAGAAAUCC 3'


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target  3':AAAGAACAUGUU-GUCAACUACUA-C-UUCUUGUGC 5'

 -9.40 2 RIC-seq
chrX:139865749:139865787:[+] chr7:120610794:120610836:[+] nonBSJ supported CDS

circRNA 5':CUUCCAGU-CAAUCAGUGUCUUCC--AGAAA--GAAAUCCAGGU 3'


            ||| || ||| |||| |||| || |||


target  3':AAAGAACAUGUU-GUCAACUACUACUUCUUGUGCUACUAUUCCU 5'

 -9.60 14 RIC-seq