Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866490:139866495:[+] chr7:17832763:17832768:[-] nonBSJ supported 3UTR

circRNA 5':AGGUAC 3'


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target  3':ACCAUU 5'

 -4.40 1 RIC-seq
chrX:139866490:139866506:[+] chr7:17832763:17832778:[-] nonBSJ supported 3UTR

circRNA 5':AGGUACGUCUUCCAGAA 3'


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target  3':ACCAUUGA-AAGGUCUG 5'

 -14.00 2 RIC-seq
chrX:139866490:139866521:[+] chr7:17832763:17832794:[-] nonBSJ supported 3UTR

circRNA 5':AGGUACGUCUUCCAGAAAAUCCACGUC--UUCCA 3'


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target  3':ACCAUUGA-AAGGUCUGAUGAUAAAUUUAAAGG 5'

 -16.70 2 RIC-seq
chrX:139866490:139866522:[+] chr7:17832763:17832795:[-] nonBSJ supported 3UTR

circRNA 5':AGGUACGUCUUCCAGAAAAUCCACGUC--UUCCAA 3'


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target  3':ACCAUUGA-AAGGUCUGAUGAUAAAUUUAAAGGU 5'

 -17.40 27 RIC-seq
chrX:139866498:139866522:[+] chr7:17832770:17832795:[-] nonBSJ supported 3UTR

circRNA 5':CUUCCAGAAAAUCCACGUC--UUCCAA 3'


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target  3':AAAGGUCUGAUGAUAAAUUUAAAGGU 5'

 -13.30 1 RIC-seq