Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865464:139865492:[+]	chr8:101730075:101730100:[-]	nonBSJ supported	CDS	circRNA 5':GAC-AAUCCAU-GUCUUCCGGACAAUCCAUG 3' \|\| \|\|\|\|\|\|\| \|:\|:\| \|\|\| \|\|\|\| target 3':AUGUUUAGGUAUCGGGAA-CCUU---GGUA 5'	-17.80	2	RIC-seq
chrX:139866742:139866795:[+]	chr8:101727775:101727827:[-]	nonBSJ supported	CDS	circRNA 5':ACUGGCUCAAUAUCCAUGUCUUCCAACG-UCUCCAGUGUGCU--GAUCUUCUGACAU 3' \|\|:\|\|\|\| \|\| \| \|\|\|\| \|\| \|\|\| :\|\| :\|\|\| \|\|::\|\|\| target 3':GGAUCGAGGUUCAAGU-C-GAAGA--GCAAGAAAUGCUCUGAAUUUAGCAGGUUGUU 5'	-27.30	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866742:139866795:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC