5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865787:139865802:[+] | chr1:205683824:205683841:[-] | nonBSJ supported | 3UTR |
circRNA 5':UCUUCCAGU-CAAUCAG 3' |:|| || |||:||| target 3':UGGAGUUCUCGUUGGUCG 5' |
-11.40 | 2 | RIC-seq |
| chrX:139865883:139865899:[+] | chr1:205683788:205683804:[-] | nonBSJ supported | 3UTR |
circRNA 5':UUCCAGUCA-AUCCACAU 3' |||||: ||||||| target 3': AGGUCGAAGUAGGUGUC 5' |
-18.60 | 35 | RIC-seq |
| chrX:139865938:139865964:[+] | chr1:205683250:205683280:[-] | nonBSJ supported | 3UTR |
circRNA 5':CUUCCUGAAGAUCCACGUCUU------CCAGAA 3' |||| |||||: | ||| ||||| target 3':CAAGGUCUUCUGUUU-C-GAAAUUAACGGUCUA 5' |
-16.00 | 15 | RIC-seq |
| chrX:139866328:139866341:[+] | chr1:205683930:205683945:[-] | nonBSJ supported | 3UTR |
circRNA 5':AUCCAGG--UCUUCCA 3' |||||| |||||| target 3':CGGGUCCAAAGAAGGA 5' |
-17.60 | 2 | RIC-seq |
| chrX:139866705:139866742:[+] | chr1:205685155:205685172:[-] | nonBSJ supported | 3UTR |
circRNA 5':UCUUCAUGUCUUCCAACAACUACCCAGUCUUCCAUCAA 3' |||| ||| ||||||| |||| target 3': GAAG-ACA--------------GGUCAGA---UAGU 5' |
-14.10 | 14 | RIC-seq |
| chrX:139866727:139866742:[+] | chr1:205685161:205685172:[-] | nonBSJ supported | 3UTR |
circRNA 5':CCCAGUCUUCCAUCAA 3' ||||||| |||| target 3':AGGUCAGA---UAGU 5' |
-13.30 | 1 | RIC-seq |
| chrX:139865419:139865442:[+] | chr1:205698703:205698724:[-] | nonBSJ supported | CDS |
circRNA 5':GGUCUUCCAGAUAAUCCUG-AGCUU 3' ||| | ||||| ||||| |:|| target 3':GUAGUA-GUCUA--AGGACUUUGAC 5' |
-15.50 | 22 | RIC-seq |
| chrX:139865425:139865442:[+] | chr1:205698708:205698724:[-] | nonBSJ supported | CDS |
circRNA 5':CCAGAUAAUCCUG-AGCUU 3' ||||| ||||| |:|| target 3':AGUCUA--AGGACUUUGAC 5' |
-15.10 | 1 | RIC-seq |
| chrX:139865428:139865442:[+] | chr1:205698710:205698724:[-] | nonBSJ supported | CDS |
circRNA 5': GAUAAUCCUG-AGCUU 3' ||| ||||| |:|| target 3':UCUA--AGGACUUUGAC 5' |
-10.60 | 1 | RIC-seq |