Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865953:139865969:[+] chr19:39369935:39369949:[-] nonBSJ supported CDS

circRNA 5':CGUCUUCCAGAAAAUCC 3'


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target  3':CCAGGAGGUCG---AGGA 5'

 -15.60 1 RIC-seq
chrX:139865953:139865970:[+] chr19:39369935:39369949:[-] nonBSJ supported CDS

circRNA 5':CGUCUUCCAGAAAAUCCA 3'


            |||:||||| |||


target  3':CCAGGAGGUCG---AGGA 5'

 -16.90 3 RIC-seq