Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865472:139865503:[+]	chr13:113537098:113537123:[+]	nonBSJ supported	3UTR	circRNA 5':AUGUCUUCCGGACAAUCCAUGUCUUCCAAGAA 3' \|\|\|\|\|:\|\|\|\| :\|\| :\|: :\|\| \|\| target 3':GACAGAGGGCC----GGGAGCGU-GGGCGCU 5'	-24.70	5	RIC-seq
chrX:139866328:139866353:[+]	chr13:113537098:113537119:[+]	nonBSJ supported	3UTR	circRNA 5':AUCCAGGUCUUCCAGGAAAUCCGUGU 3' \|\|\| \|\|:\|:\|\| \|:\|\|\|:\| target 3':GAGGGCCGGGAGCG----UGGGCGCU 5'	-22.60	6	RIC-seq
chrX:139866672:139866713:[+]	chr13:113464935:113464983:[+]	nonBSJ supported	CDS	circRNA 5':CCACGUCUUCCA-GCAUC-UCUGU-----GUCUU--CCAGCAUCUUCAUGU 3' \|\|\| \|\|\| \|\|\|\| \|\|\|\|: \|\|\| \|\|\|\| \|\|\|\|\|\|\|: target 3':UGUGACCAAGUACCGUAACAGACGAAAUACAGCUUCGGUC--AGAAGUAUU 5'	-25.40	1	RIC-seq
chrX:139866672:139866717:[+]	chr13:113464931:113464983:[+]	nonBSJ supported	CDS	circRNA 5':CCACGUCUUCCA-GCAUC-UCUGU-----GUCUU--CCAGCAUCUUCAUGUCUUC 3' \|\|\| \|\|\| \|\|\|\| \|\|\|\|: \|\|\| \|\|\|\| \|\|\|\|\|\|\|: \|:: target 3':UGUGACCAAGUACCGUAACAGACGAAAUACAGCUUCGGUC--AGAAGUAUUGGGA 5'	-26.60	17	RIC-seq