Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865562:139865598:[+] chr17:58121305:58121332:[-] nonBSJ supported CDS

circRNA 5':GGUCUUCCACCAAAUCCAGAUCUUCC---AGGAAAAU-CCA 3'


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target  3': CAGAA-GUG----------AGAAGACAUUUCGCCACUGG 5'

 -10.20 2 RIC-seq
chrX:139865617:139865658:[+] chr17:58121305:58121332:[-] nonBSJ supported CDS

circRNA 5':UGUCUUCCAAUAAUUUCAAGGUCUUCCAUCAAAUACAGAUCU 3'


            |||||| : ||||| ||:|


target  3': CAGAAG------------UGAGAAGACAUUUCGCCACUGG 5'

 -11.90 16 RIC-seq