Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866731:139866772:[+] chr2:240243331:240243371:[-] nonBSJ supported Intron

circRNA 5':GUCUUCCAU-------CAACUGGCUCAAUAUCCAUGUCUUCCAACGUCU 3'


            |||||| ||||:::|||| || ||||| |||


target  3': AGAAGGAAAAUCACUGUUGGUUGAGUACG----AC-GAAGGA--CAGU 5'

 -26.90 1 RIC-seq
chrX:139866731:139866782:[+] chr2:240243331:240243378:[-] nonBSJ supported Intron

circRNA 5':GUCUUCCAU-------CAACUGGCUCAAUAUCCAUGUCUUCCAACGUCUCCAGUGUGCU 3'


            |||||| ||||:::|||| || ||||| ||| || ||:|


target  3': AGAAGGAAAAUCACUGUUGGUUGAGUACG----AC-GAAGGA--CAG---UCUCAUGU 5'

 -31.10 1 RIC-seq