Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866515:139866540:[+] chrY:2848420:2848449:[+] nonBSJ supported 3UTR

circRNA 5':UCUUCCAACCA----AGCC-AUGUCUUCCAG 3'


            ||:||| ||| ||||| ||||


target  3':GGAGGGUAAAUAUAAUCGUCUACAG-AGGUU 5'

 -18.10 1 RIC-seq
chrX:139866525:139866540:[+] chrY:2848420:2848435:[+] nonBSJ supported 3UTR

circRNA 5':AAGCC-AUGUCUUCCAG 3'


            ||| ||||| ||||


target  3':AUCGUCUACAG-AGGUU 5'

 -13.30 1 RIC-seq
chrX:139866629:139866656:[+] chrY:2850474:2850499:[+] nonBSJ supported 3UTR

circRNA 5':AGCA---UCUCCAGGGCUUCCAGCAUCUGCU 3'


            ||| |||| :| :||| |:|


target  3':ACGUAUAAGAGUUUAUG-----UGUAAAUGU 5'

 -9.90 2 RIC-seq