Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866032:139866063:[+] chr3:49412987:49413015:[-] nonBSJ supported CDS

circRNA 5':CCCAACAAUC-CAAG--UCUUCCGGAUAAUUUGGG 3'


            ||||||||| | || ||||||||| |||


target  3':UGGUUGUUAGUGGUCAAAGAAGGCCU-----ACC 5'

 -29.90 1 RIC-seq
chrX:139866032:139866072:[+] chr3:49412987:49413027:[-] nonBSJ supported CDS

circRNA 5':CCCAACAAUC-CAAG--UCUUCCGGAUAAUUUGGGUC-UUCCUGA 3'


            ||||||||| | || |||||||||| :|:| || |||


target  3':UGGUUGUUAGUGGUCAAAGAAGGCCUACCG---UCGGUAACGAC 5'

 -34.10 1 RIC-seq