Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865573:139865592:[+]	chr2:183867997:183868017:[-]	nonBSJ supported	CDS	circRNA 5':AAAU-CCAGAUCUUCCAGGAA 3' \|\|\| \|\|\|\|\|\| \|\| \|\|\|:\| target 3':AUUACGGUCUAAAAAGUCUUA 5'	-13.10	26	RIC-seq
chrX:139866253:139866299:[+]	chr2:183821194:183821232:[-]	nonBSJ supported	CDS	circRNA 5':CAAAGCCAUGUCUUCCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGU 3' \|\|\|\|\| \|:\| \|\|\|\|\|\|\| \|\|\| :\|\| \|\| \|\|:\|\| target 3':AUUUCGC-AUA-AAGGUCUACUCUU--CAG-----UUUAUAAGAGCAC 5'	-16.10	29	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr2:183821194:183821232:[-]	target	3773720	chr2:183821231-183821232	TG>T	NCKAP1-associated_Neurodevelopmental_disorder	ClinVar