5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865560:139865623:[+] | chr12:991116:991176:[+] | nonBSJ supported | CDS |
circRNA 5':CUGGUCUU-CCACCAAAUCCAGAUCUUCCAGGAAAAUCCACGUCUUCCA--GGAAAUCC--AUG-UCUUC 3' |||| | || || |||||| || |:|||||| |||| |:| |||: target 3':AGCCAUUACGGCAAAACA--UCAAGAAGGAA-------GUACGGAAGGUGACCUUCUACCCUGCAAGAGU 5' |
-26.20 | 2 | RIC-seq |
| chrX:139865673:139865711:[+] | chr12:994524:994566:[+] | nonBSJ supported | CDS |
circRNA 5': GUCUUCCAGAAAAAUCUGUGU-CUUCC-ACCAAAUCCA-AGU 3' ||||| ||||: || | |||| ||: target 3':ACAGAAUAGAUCACUC-ACACGCGAUUGAUGGUGCCAAAGUCGA 5' |
-14.90 | 1 | RIC-seq |
| chrX:139865661:139865713:[+] | chr12:1010084:1010117:[+] | nonBSJ supported | Intron |
circRNA 5':CAGCUAA---UCCAUGUCUUCCAGAAAAAUCUGUGUCUUCCACCAAAUC--CAAGUCU 3' |||: |||| :|| |||||| |||||| target 3':UUCGGAUUCAAGGUUUAG------------------------GGUUUACUCGUUCAGU 5' |
-18.70 | 2 | RIC-seq |