Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866317:139866339:[+]	chr1:36755081:36755098:[+]	nonBSJ supported	CDS	circRNA 5':GCUUCCGAAAAAUCCAGGUCUUC 3' \|:\|\|\| \|\|\|\|\| \|\|:\|\| target 3':AGGAGG------AGGUCGAGGAGA 5'	-19.70	1	RIC-seq
chrX:139866337:139866368:[+]	chr1:36755083:36755111:[+]	nonBSJ supported	CDS	circRNA 5':UUCCAGGAAAUCCGUGUCUUCCAGCAAAUCCA 3' \|\| \|\|\|\|\| \| : \|\|:\|\|\|\|\|\| \|\|\| target 3':GAGACCCUUUCUGAGGAGGAGGUCG---AGGA 5'	-26.30	16	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866317:139866339:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC