Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866680:139866753:[+] chr14:57741351:57741397:[+] nonBSJ supported CDS

circRNA 5':UCCA-----GCAUCUCUGUGUCUUCCAGCAUCUUCAUGUCUUCCAACAACUACCCAGUCUUCCAUCAACUGGCUCAAUA 3'


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target  3':UGGUUUACCUGUUCGGACGUCU----UCGU-------------------------UCAGUCC---GUUGACCGAGUUAA 5'

 -30.50 16 RIC-seq
chrX:139866730:139866753:[+] chr14:57741351:57741370:[+] nonBSJ supported CDS

circRNA 5':AGUCUUCCAUCAACUGGCUCAAUA 3'


            ||| |||||||||||||


target  3': CAGUCC---GUUGACCGAGUUAA 5'

 -22.30 12 RIC-seq
chrX:139866736:139866753:[+] chr14:57741351:57741369:[+] nonBSJ supported CDS

circRNA 5':CCAU-CAACUGGCUCAAUA 3'


            || |||||||||||||


target  3':AGUCCGUUGACCGAGUUAA 5'

 -21.70 2 RIC-seq